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LOC109336388 xyloglucan glycosyltransferase 4-like [ Lupinus angustifolius (narrow-leaved blue lupine) ]

Gene ID: 109336388, updated on 1-Feb-2024

Summary

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Gene symbol
LOC109336388
Gene description
xyloglucan glycosyltransferase 4-like
Locus tag
TanjilG_13157
Gene type
protein coding
RefSeq status
MODEL
Organism
Lupinus angustifolius
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Genomic context

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See LOC109336388 in Genome Data Viewer
Location:
chromosome: LG20
Exon count:
4
Annotation release Status Assembly Chr Location
100 current LupAngTanjil_v1.0 (GCF_001865875.1) LG20 NC_032028.1 (17658880..17662735)

Chromosome LG20 - NC_032028.1Genomic Context describing neighboring genes Neighboring gene protein ALTERED XYLOGLUCAN 4-like Neighboring gene uncharacterized LOC109335858 Neighboring gene uncharacterized LOC109335179 Neighboring gene uncharacterized LOC109335189

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_032028.1 Chromosome LG20 Reference LupAngTanjil_v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome sequencing of different narrow-leafed lupin tissue types provides a comprehensive uni-gene assembly and extensive gene-based molecular markers. Kamphuis LG, et al. Plant Biotechnol J, 2015 Jan. PMID 25060816, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
xyloglucan glycosyltransferase 4-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lupinus angustifolius Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference LupAngTanjil_v1.0

Genomic

  1. NC_032028.1 Reference LupAngTanjil_v1.0

    Range
    17658880..17662735
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019572954.1 → XP_019428499.1  xyloglucan glycosyltransferase 4-like

RNA

  1. XR_002106346.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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