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LOC109329813 callose synthase 11 [ Lupinus angustifolius (narrow-leaved blue lupine) ]

Gene ID: 109329813, updated on 1-Feb-2024

Summary

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Gene symbol
LOC109329813
Gene description
callose synthase 11
Locus tag
TanjilG_13088
Gene type
protein coding
RefSeq status
MODEL
Organism
Lupinus angustifolius
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Genomic context

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See LOC109329813 in Genome Data Viewer
Location:
chromosome: LG16
Exon count:
3
Annotation release Status Assembly Chr Location
100 current LupAngTanjil_v1.0 (GCF_001865875.1) LG16 NC_032024.1 (1048226..1055251)

Chromosome LG16 - NC_032024.1Genomic Context describing neighboring genes Neighboring gene DNA-directed RNA polymerase II subunit RPB2-like Neighboring gene DNA-directed RNA polymerase II subunit RPB2-like Neighboring gene uncharacterized LOC109330174 Neighboring gene uncharacterized LOC109330173

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_032024.1 Chromosome LG16 Reference LupAngTanjil_v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome sequencing of different narrow-leafed lupin tissue types provides a comprehensive uni-gene assembly and extensive gene-based molecular markers. Kamphuis LG, et al. Plant Biotechnol J, 2015 Jan. PMID 25060816, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1,3-beta-D-glucan synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in (1->3)-beta-D-glucan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of 1,3-beta-D-glucan synthase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
callose synthase 11

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lupinus angustifolius Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference LupAngTanjil_v1.0

Genomic

  1. NC_032024.1 Reference LupAngTanjil_v1.0

    Range
    1048226..1055251
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019563655.1 → XP_019419200.1  callose synthase 11

    UniProtKB/TrEMBL
    A0A1J7H2Z2

  2. XM_019563653.1 → XP_019419198.1  callose synthase 11

    UniProtKB/TrEMBL
    A0A1J7H2Z2
Nucleotide Protein
Heading Accession and Version

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