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LOC109327160 F-box protein GID2 [ Lupinus angustifolius (narrow-leaved blue lupine) ]

Gene ID: 109327160, updated on 1-Feb-2024

Summary

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Gene symbol
LOC109327160
Gene description
F-box protein GID2
Locus tag
TanjilG_12411
Gene type
protein coding
RefSeq status
MODEL
Organism
Lupinus angustifolius
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Genomic context

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See LOC109327160 in Genome Data Viewer
Location:
chromosome: LG14
Exon count:
1
Annotation release Status Assembly Chr Location
100 current LupAngTanjil_v1.0 (GCF_001865875.1) LG14 NC_032022.1 (15494600..15495813)

Chromosome LG14 - NC_032022.1Genomic Context describing neighboring genes Neighboring gene G2/mitotic-specific cyclin C13-1-like Neighboring gene uncharacterized LOC109326552 Neighboring gene probable carbohydrate esterase At4g34215 Neighboring gene probable isoaspartyl peptidase/L-asparaginase 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_032022.1 Chromosome LG14 Reference LupAngTanjil_v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome sequencing of different narrow-leafed lupin tissue types provides a comprehensive uni-gene assembly and extensive gene-based molecular markers. Kamphuis LG, et al. Plant Biotechnol J, 2015 Jan. PMID 25060816, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in gibberellic acid mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of gibberellic acid mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SCF ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
F-box protein GID2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lupinus angustifolius Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference LupAngTanjil_v1.0

Genomic

  1. NC_032022.1 Reference LupAngTanjil_v1.0

    Range
    15494600..15495813
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019560224.1 → XP_019415769.1  F-box protein GID2

    UniProtKB/TrEMBL
    A0A4P1QYY5
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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