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HACD4 3-hydroxyacyl-CoA dehydratase 4 [ Crocodylus porosus (Australian saltwater crocodile) ]

Gene ID: 109323363, updated on 14-Mar-2024

Summary

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Gene symbol
HACD4
Gene description
3-hydroxyacyl-CoA dehydratase 4
See related
Ensembl:ENSCPRG00005015566
Gene type
protein coding
RefSeq status
MODEL
Organism
Crocodylus porosus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Longirostres; Crocodylidae; Crocodylus
Orthologs
human mouse all
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Genomic context

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See HACD4 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current CroPor_comp1 (GCF_001723895.1) Unplaced Scaffold NW_017728950.1 (46778871..46802853)

NW_017728950.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109323306 Neighboring gene interferon alpha-2-like Neighboring gene focadhesin Neighboring gene MLLT3 super elongation complex subunit Neighboring gene uncharacterized LOC109323744

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017728950.1 Unplaced Scaffold Reference CroPor_comp1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3-hydroxyacyl-CoA dehydratase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid elongation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sphingolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in very long-chain fatty acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Crocodylus porosus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CroPor_comp1 Primary Assembly

Genomic

  1. NW_017728950.1 Reference CroPor_comp1 Primary Assembly

    Range
    46778871..46802853
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019554786.1 → XP_019410331.1  very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 4

    UniProtKB/TrEMBL
    A0A7M4FFX1
    Related
    ENSCPRP00005022322.1, ENSCPRT00005026105.1

RNA

  1. XR_002104638.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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