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SLC3A1 solute carrier family 3 member 1 [ Crocodylus porosus (Australian saltwater crocodile) ]

Gene ID: 109319652, updated on 14-Mar-2024

Summary

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Gene symbol
SLC3A1
Gene description
solute carrier family 3 member 1
See related
Ensembl:ENSCPRG00005015386
Gene type
protein coding
RefSeq status
MODEL
Organism
Crocodylus porosus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Longirostres; Crocodylidae; Crocodylus
Orthologs
human mouse all
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Genomic context

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See SLC3A1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current CroPor_comp1 (GCF_001723895.1) Unplaced Scaffold NW_017728943.1 (55034558..55054021, complement)

NW_017728943.1Genomic Context describing neighboring genes Neighboring gene calmodulin-lysine N-methyltransferase Neighboring gene prolyl endopeptidase like Neighboring gene protein phosphatase, Mg2+/Mn2+ dependent 1B Neighboring gene leucine rich pentatricopeptide repeat containing

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017728943.1 Unplaced Scaffold Reference CroPor_comp1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in amino acid transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
neutral and basic amino acid transport protein rBAT

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Crocodylus porosus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CroPor_comp1 Primary Assembly

Genomic

  1. NW_017728943.1 Reference CroPor_comp1 Primary Assembly

    Range
    55034558..55054021 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019549376.1 → XP_019404921.1  neutral and basic amino acid transport protein rBAT

    UniProtKB/TrEMBL
    A0A7M4FAD7
    Related
    ENSCPRP00005022078.1, ENSCPRT00005025816.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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