U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

PTGIS prostaglandin I2 synthase [ Crocodylus porosus (Australian saltwater crocodile) ]

Gene ID: 109313135, updated on 14-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
PTGIS
Gene description
prostaglandin I2 synthase
See related
Ensembl:ENSCPRG00005008625
Gene type
protein coding
RefSeq status
MODEL
Organism
Crocodylus porosus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Longirostres; Crocodylidae; Crocodylus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See PTGIS in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current CroPor_comp1 (GCF_001723895.1) Unplaced Scaffold NW_017728922.1 (1703761..1732905)

NW_017728922.1Genomic Context describing neighboring genes Neighboring gene protein-glutamine gamma-glutamyltransferase E-like Neighboring gene protein-glutamine gamma-glutamyltransferase E-like Neighboring gene potassium voltage-gated channel subfamily B member 1 Neighboring gene uncharacterized LOC109313137 Neighboring gene somatomedin-B and thrombospondin type-1 domain-containing protein-like

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_017728922.1 Unplaced Scaffold Reference CroPor_comp1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heme binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables monooxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables prostaglandin-I synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in prostaglandin biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
prostacyclin synthase

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Crocodylus porosus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CroPor_comp1 Primary Assembly

Genomic

  1. NW_017728922.1 Reference CroPor_comp1 Primary Assembly

    Range
    1703761..1732905
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019539558.1 → XP_019395103.1  prostacyclin synthase

    UniProtKB/TrEMBL
    A0A7M4FW46
    Related
    ENSCPRP00005012110.1, ENSCPRT00005014268.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.