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ACSL6 acyl-CoA synthetase long chain family member 6 [ Crocodylus porosus (Australian saltwater crocodile) ]

Gene ID: 109310079, updated on 14-Mar-2024

Summary

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Gene symbol
ACSL6
Gene description
acyl-CoA synthetase long chain family member 6
See related
Ensembl:ENSCPRG00005010222
Gene type
protein coding
RefSeq status
MODEL
Organism
Crocodylus porosus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Longirostres; Crocodylidae; Crocodylus
Orthologs
human mouse all
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Genomic context

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See ACSL6 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
24
Annotation release Status Assembly Chr Location
100 current CroPor_comp1 (GCF_001723895.1) Unplaced Scaffold NW_017728914.1 (26467065..26575299)

NW_017728914.1Genomic Context describing neighboring genes Neighboring gene PDZ and LIM domain 4 Neighboring gene prolyl 4-hydroxylase subunit alpha 2 Neighboring gene meiotic kinetochore factor Neighboring gene folliculin interacting protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017728914.1 Unplaced Scaffold Reference CroPor_comp1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables arachidonate-CoA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in long-chain fatty acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in long-chain fatty-acyl-CoA biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in very long-chain fatty acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
long-chain-fatty-acid--CoA ligase 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Crocodylus porosus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CroPor_comp1 Primary Assembly

Genomic

  1. NW_017728914.1 Reference CroPor_comp1 Primary Assembly

    Range
    26467065..26575299
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019535051.1 → XP_019390596.1  long-chain-fatty-acid--CoA ligase 6 isoform X4

    UniProtKB/TrEMBL
    A0A7M4ET39

  2. XM_019535048.1 → XP_019390593.1  long-chain-fatty-acid--CoA ligase 6 isoform X1

    UniProtKB/TrEMBL
    A0A7M4EVT5
    Related
    ENSCPRP00005014563.1, ENSCPRT00005017103.1

  3. XM_019535050.1 → XP_019390595.1  long-chain-fatty-acid--CoA ligase 6 isoform X3

    UniProtKB/TrEMBL
    A0A7M4ET39

  4. XM_019535049.1 → XP_019390594.1  long-chain-fatty-acid--CoA ligase 6 isoform X2

    UniProtKB/TrEMBL
    A0A7M4ET39
    Related
    ENSCPRP00005014568.1, ENSCPRT00005017110.1
Nucleotide Protein
Heading Accession and Version

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