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CRPPA CDP-L-ribitol pyrophosphorylase A [ Crocodylus porosus (Australian saltwater crocodile) ]

Gene ID: 109309368, updated on 14-Mar-2024

Summary

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Gene symbol
CRPPA
Gene description
CDP-L-ribitol pyrophosphorylase A
See related
Ensembl:ENSCPRG00005015162
Gene type
protein coding
RefSeq status
MODEL
Organism
Crocodylus porosus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Longirostres; Crocodylidae; Crocodylus
Also known as
ISPD
Orthologs
human mouse all
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Genomic context

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See CRPPA in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current CroPor_comp1 (GCF_001723895.1) Unplaced Scaffold NW_017728886.1 (52419121..52653018, complement)

NW_017728886.1Genomic Context describing neighboring genes Neighboring gene alkylglycerol monooxygenase Neighboring gene mesenchyme homeobox 2 Neighboring gene uncharacterized LOC109309374 Neighboring gene sclerostin domain containing 1 Neighboring gene leucine rich repeat containing 72

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017728886.1 Unplaced Scaffold Reference CroPor_comp1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables D-ribitol-5-phosphate cytidylyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in isoprenoid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
isoprenoid synthase domain-containing protein
Names
isoprenoid synthase domain containing

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Crocodylus porosus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CroPor_comp1 Primary Assembly

Genomic

  1. NW_017728886.1 Reference CroPor_comp1 Primary Assembly

    Range
    52419121..52653018 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019534084.1 → XP_019389629.1  isoprenoid synthase domain-containing protein isoform X2

    UniProtKB/TrEMBL
    A0A7M4FBC4

  2. XM_019534074.1 → XP_019389619.1  isoprenoid synthase domain-containing protein isoform X1

    UniProtKB/TrEMBL
    A0A7M4FBC4, A0A7M4FCJ1
    Related
    ENSCPRP00005021812.1, ENSCPRT00005025490.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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