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B3GNT5 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 [ Crocodylus porosus (Australian saltwater crocodile) ]

Gene ID: 109308475, updated on 2-May-2024

Summary

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Gene symbol
B3GNT5
Gene description
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5
See related
Ensembl:ENSCPRG00005010707
Gene type
protein coding
RefSeq status
MODEL
Organism
Crocodylus porosus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Longirostres; Crocodylidae; Crocodylus
Orthologs
human mouse all
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Genomic context

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See B3GNT5 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
100 current CroPor_comp1 (GCF_001723895.1) Unplaced Scaffold NW_017728910.1 (21466716..21488791)

NW_017728910.1Genomic Context describing neighboring genes Neighboring gene methylcrotonyl-CoA carboxylase subunit 1 Neighboring gene lysosomal associated membrane protein 3 Neighboring gene MCF.2 cell line derived transforming sequence-like 2 Neighboring gene uncharacterized LOC109308476 Neighboring gene replication factor C subunit 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017728910.1 Unplaced Scaffold Reference CroPor_comp1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in brain development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Crocodylus porosus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CroPor_comp1 Primary Assembly

Genomic

  1. NW_017728910.1 Reference CroPor_comp1 Primary Assembly

    Range
    21466716..21488791
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019532787.1 → XP_019388332.1  lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase

    UniProtKB/TrEMBL
    A0A7M4EXS1
    Related
    ENSCPRP00005015253.1, ENSCPRT00005017905.1

  2. XM_019532788.1 → XP_019388333.1  lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase

    UniProtKB/TrEMBL
    A0A7M4EXS1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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