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PLCH1 phospholipase C eta 1 [ Crocodylus porosus (Australian saltwater crocodile) ]

Gene ID: 109308363, updated on 14-Mar-2024

Summary

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Gene symbol
PLCH1
Gene description
phospholipase C eta 1
See related
Ensembl:ENSCPRG00005007105
Gene type
protein coding
RefSeq status
MODEL
Organism
Crocodylus porosus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Longirostres; Crocodylidae; Crocodylus
Orthologs
human mouse all
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Genomic context

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See PLCH1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
23
Annotation release Status Assembly Chr Location
100 current CroPor_comp1 (GCF_001723895.1) Unplaced Scaffold NW_017728910.1 (4124533..4305003, complement)

NW_017728910.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109308360 Neighboring gene membrane metalloendopeptidase Neighboring gene uncharacterized LOC109308362 Neighboring gene uncharacterized LOC109308361 Neighboring gene uncharacterized LOC109308366 Neighboring gene uncharacterized LOC109308367 Neighboring gene chromosome unknown C3orf33 homolog

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017728910.1 Unplaced Scaffold Reference CroPor_comp1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylinositol phospholipase C activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phosphatidylinositol-mediated signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Crocodylus porosus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CroPor_comp1 Primary Assembly

Genomic

  1. NW_017728910.1 Reference CroPor_comp1 Primary Assembly

    Range
    4124533..4305003 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019532624.1 → XP_019388169.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-1 isoform X2

    UniProtKB/TrEMBL
    A0A7M4EI02
    Related
    ENSCPRP00005010094.1, ENSCPRT00005011891.1

  2. XM_019532623.1 → XP_019388168.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-1 isoform X1

    UniProtKB/TrEMBL
    A0A7M4EI02
    Related
    ENSCPRP00005010130.1, ENSCPRT00005011935.1
Nucleotide Protein
Heading Accession and Version

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