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CTBS chitobiase [ Crocodylus porosus (Australian saltwater crocodile) ]

Gene ID: 109307341, updated on 14-Mar-2024

Summary

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Gene symbol
CTBS
Gene description
chitobiase
See related
Ensembl:ENSCPRG00005017066
Gene type
protein coding
RefSeq status
MODEL
Organism
Crocodylus porosus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Longirostres; Crocodylidae; Crocodylus
Orthologs
human mouse all
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Genomic context

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See CTBS in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current CroPor_comp1 (GCF_001723895.1) Unplaced Scaffold NW_017728907.1 (38512247..38522046)

NW_017728907.1Genomic Context describing neighboring genes Neighboring gene vitellogenin-2-like Neighboring gene vitellogenin-2-like Neighboring gene spermatogenesis associated 1 Neighboring gene G protein subunit gamma 5 Neighboring gene ribosome production factor 1 homolog

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017728907.1 Unplaced Scaffold Reference CroPor_comp1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chitin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables chitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chitin catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
di-N-acetylchitobiase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Crocodylus porosus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CroPor_comp1 Primary Assembly

Genomic

  1. NW_017728907.1 Reference CroPor_comp1 Primary Assembly

    Range
    38512247..38522046
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019531181.1 → XP_019386726.1  di-N-acetylchitobiase

    UniProtKB/TrEMBL
    A0A7M4FIP1
    Related
    ENSCPRP00005024535.1, ENSCPRT00005028661.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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