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LOC109307178 torsin-1A-interacting protein 2-like [ Crocodylus porosus (Australian saltwater crocodile) ]

Gene ID: 109307178, updated on 9-Nov-2023

Summary

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Gene symbol
LOC109307178
Gene description
torsin-1A-interacting protein 2-like
See related
Ensembl:ENSCPRG00005006376
Gene type
protein coding
RefSeq status
MODEL
Organism
Crocodylus porosus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Longirostres; Crocodylidae; Crocodylus
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Genomic context

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See LOC109307178 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current CroPor_comp1 (GCF_001723895.1) Unplaced Scaffold NW_017728907.1 (19813984..19830194, complement)

NW_017728907.1Genomic Context describing neighboring genes Neighboring gene family with sequence similarity 163 member A Neighboring gene ADAMTS-like protein 2 Neighboring gene uncharacterized LOC109307180 Neighboring gene torsin-1A-interacting protein 1-like Neighboring gene centrosomal protein 350

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017728907.1 Unplaced Scaffold Reference CroPor_comp1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in membrane organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
torsin-1A-interacting protein 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Crocodylus porosus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CroPor_comp1 Primary Assembly

Genomic

  1. NW_017728907.1 Reference CroPor_comp1 Primary Assembly

    Range
    19813984..19830194 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019530938.1 → XP_019386483.1  torsin-1A-interacting protein 2-like isoform X2

    UniProtKB/TrEMBL
    A0A7M4EH55

  2. XM_019530936.1 → XP_019386481.1  torsin-1A-interacting protein 2-like isoform X1

    UniProtKB/TrEMBL
    A0A7M4EH55
    Related
    ENSCPRP00005008934.1, ENSCPRT00005010516.1

  3. XM_019530935.1 → XP_019386480.1  torsin-1A-interacting protein 2-like isoform X1

    UniProtKB/TrEMBL
    A0A7M4EH55

  4. XM_019530937.1 → XP_019386482.1  torsin-1A-interacting protein 2-like isoform X1

    UniProtKB/TrEMBL
    A0A7M4EH55
    Related
    ENSCPRP00005008935.1, ENSCPRT00005010517.1
Nucleotide Protein
Heading Accession and Version

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