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Orai1 ORAI calcium release-activated calcium modulator 1 [ Mus musculus (house mouse) ]

Gene ID: 109305, updated on 2-Nov-2024

Summary

Official Symbol
Orai1provided by MGI
Official Full Name
ORAI calcium release-activated calcium modulator 1provided by MGI
Primary source
MGI:MGI:1925542
See related
Ensembl:ENSMUSG00000049686 AllianceGenome:MGI:1925542
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
orai-1; Tmem142a; D730049H07Rik
Summary
Enables store-operated calcium channel activity. Involved in G protein-coupled receptor signaling pathway; ligand-gated ion channel signaling pathway; and positive regulation of insulin secretion. Acts upstream of or within calcium ion import; mammary gland epithelium development; and store-operated calcium entry. Located in basolateral plasma membrane. Is active in plasma membrane. Is expressed in several structures, including alimentary system; brain; genitourinary system; respiratory system; and skin. Human ortholog(s) of this gene implicated in immunodeficiency 9 and tubular aggregate myopathy 2. Orthologous to human ORAI1 (ORAI calcium release-activated calcium modulator 1). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Ubiquitous expression in duodenum adult (RPKM 54.2), lung adult (RPKM 35.6) and 26 other tissues See more
Orthologs
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Genomic context

See Orai1 in Genome Data Viewer
Location:
5 F; 5 62.72 cM
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (123153078..123168515)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (123015074..123030452)

Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA A930024E05 gene Neighboring gene STARR-seq mESC enhancer starr_14304 Neighboring gene predicted gene 2479 Neighboring gene STARR-positive B cell enhancer ABC_E3616 Neighboring gene STARR-positive B cell enhancer mm9_chr5:123489053-123489354 Neighboring gene MORN repeat containing 3 Neighboring gene predicted gene, 42023 Neighboring gene STARR-seq mESC enhancer starr_14309 Neighboring gene STARR-positive B cell enhancer ABC_E6376 Neighboring gene predicted gene 6444

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables calcium channel activity ISO
Inferred from Sequence Orthology
more info
 
enables calmodulin binding IEA
Inferred from Electronic Annotation
more info
 
enables identical protein binding IEA
Inferred from Electronic Annotation
more info
 
enables identical protein binding ISO
Inferred from Sequence Orthology
more info
 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables store-operated calcium channel activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables store-operated calcium channel activity IMP
Inferred from Mutant Phenotype
more info
PubMed 
enables store-operated calcium channel activity ISO
Inferred from Sequence Orthology
more info
PubMed 
enables store-operated calcium channel activity ISS
Inferred from Sequence or Structural Similarity
more info
 
Process Evidence Code Pubs
involved_in adaptive immune response IEA
Inferred from Electronic Annotation
more info
 
involved_in calcineurin-NFAT signaling cascade ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within calcium ion import IDA
Inferred from Direct Assay
more info
PubMed 
involved_in calcium ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 
involved_in calcium ion transmembrane transport ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within calcium-ion regulated exocytosis ISO
Inferred from Sequence Orthology
more info
PubMed 
acts_upstream_of_or_within establishment of localization in cell ISO
Inferred from Sequence Orthology
more info
PubMed 
involved_in ion channel modulating, G protein-coupled receptor signaling pathway IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in ion channel modulating, G protein-coupled receptor signaling pathway ISO
Inferred from Sequence Orthology
more info
PubMed 
involved_in ligand-gated ion channel signaling pathway IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in ligand-gated ion channel signaling pathway ISO
Inferred from Sequence Orthology
more info
PubMed 
acts_upstream_of_or_within mammary gland epithelium development IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in phospholipase C-activating G protein-coupled acetylcholine receptor signaling pathway ISO
Inferred from Sequence Orthology
more info
PubMed 
involved_in phospholipase C-activating G protein-coupled receptor signaling pathway IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in positive regulation of adenylate cyclase activity ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of adenylate cyclase activity ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in positive regulation of calcium ion transport ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of calcium ion transport ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in positive regulation of insulin secretion IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in positive regulation of insulin secretion ISO
Inferred from Sequence Orthology
more info
PubMed 
involved_in regulation of calcium ion transport ISO
Inferred from Sequence Orthology
more info
 
involved_in store-operated calcium entry IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within store-operated calcium entry IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in store-operated calcium entry ISO
Inferred from Sequence Orthology
more info
PubMed 
involved_in store-operated calcium entry ISS
Inferred from Sequence or Structural Similarity
more info
 
Component Evidence Code Pubs
located_in basolateral plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in cell periphery ISO
Inferred from Sequence Orthology
more info
PubMed 
located_in growth cone ISO
Inferred from Sequence Orthology
more info
 
is_active_in membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in membrane raft ISO
Inferred from Sequence Orthology
more info
 
located_in membrane raft ISS
Inferred from Sequence or Structural Similarity
more info
 
is_active_in plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in plasma membrane ISO
Inferred from Sequence Orthology
more info
PubMed 
located_in plasma membrane ISO
Inferred from Sequence Orthology
more info
 
located_in plasma membrane ISS
Inferred from Sequence or Structural Similarity
more info
 
located_in plasma membrane raft ISO
Inferred from Sequence Orthology
more info
 
located_in plasma membrane raft ISS
Inferred from Sequence or Structural Similarity
more info
 
located_in synapse IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
calcium release-activated calcium channel protein 1
Names
calcium release-activated calcium channel 1
protein orai-1
transmembrane protein 142A

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_175423.3NP_780632.1  calcium release-activated calcium channel protein 1

    See identical proteins and their annotated locations for NP_780632.1

    Status: VALIDATED

    Source sequence(s)
    AK052573, AK085755, BQ553253
    Consensus CDS
    CCDS39261.1
    UniProtKB/Swiss-Prot
    Q8BUD4, Q8BWG9, Q8R586
    UniProtKB/TrEMBL
    A3KCG1
    Related
    ENSMUSP00000113097.2, ENSMUST00000121652.8
    Conserved Domains (1) summary
    pfam07856
    Location:75270
    Orai-1; Mediator of CRAC channel activity

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000071.7 Reference GRCm39 C57BL/6J

    Range
    123153078..123168515
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006530116.4XP_006530179.1  calcium release-activated calcium channel protein 1 isoform X1

    See identical proteins and their annotated locations for XP_006530179.1

    Conserved Domains (1) summary
    pfam07856
    Location:1165
    Orai-1; Mediator of CRAC channel activity
  2. XM_006530117.4XP_006530180.1  calcium release-activated calcium channel protein 1 isoform X1

    See identical proteins and their annotated locations for XP_006530180.1

    Conserved Domains (1) summary
    pfam07856
    Location:1165
    Orai-1; Mediator of CRAC channel activity