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AGPAT2 1-acylglycerol-3-phosphate O-acyltransferase 2 [ Gavialis gangeticus (Gharial) ]

Gene ID: 109292749, updated on 14-Mar-2024

Summary

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Gene symbol
AGPAT2
Gene description
1-acylglycerol-3-phosphate O-acyltransferase 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Gavialis gangeticus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Longirostres; Gavialidae; Gavialinae; Gavialis
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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See AGPAT2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current GavGan_comp1 (GCF_001723915.1) Unplaced Scaffold NW_017729011.1 (21248859..21262321)

NW_017729011.1Genomic Context describing neighboring genes Neighboring gene tigger transposable element-derived protein 4-like Neighboring gene divergent protein kinase domain 1B Neighboring gene EGF like domain multiple 7 Neighboring gene notch receptor 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017729011.1 Unplaced Scaffold Reference GavGan_comp1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1-acylglycerol-3-phosphate O-acyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phosphatidic acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
1-acyl-sn-glycerol-3-phosphate acyltransferase beta

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gavialis gangeticus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GavGan_comp1 Primary Assembly

Genomic

  1. NW_017729011.1 Reference GavGan_comp1 Primary Assembly

    Range
    21248859..21262321
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019510307.1 → XP_019365852.1  1-acyl-sn-glycerol-3-phosphate acyltransferase beta

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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