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HSD3B1 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1 [ Alligator mississippiensis (American alligator) ]

Gene ID: 109280168, updated on 19-Jun-2024

Summary

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Gene symbol
HSD3B1
Gene description
hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1
Locus tag
Y1Q_0008548
See related
EnsemblRapid:ENSAMIG00015016640
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator mississippiensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Also known as
3B-HSD; HSD3B2
Orthologs
human mouse all
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Genomic context

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See HSD3B1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_09 current rAllMis1 (GCF_030867095.1) 1 NC_081824.1 (239007586..239021695, complement)
102 previous assembly ASM28112v4 (GCF_000281125.3) Unplaced Scaffold NW_017714231.1 (6056078..6070215, complement)

Chromosome 1 - NC_081824.1Genomic Context describing neighboring genes Neighboring gene mannosidase alpha class 1A member 2 Neighboring gene uncharacterized LOC132250119 Neighboring gene hydroxyacid oxidase 2 Neighboring gene tryptophanyl tRNA synthetase 2, mitochondrial Neighboring gene uncharacterized LOC132247677

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3-beta-hydroxy-delta5-steroid dehydrogenase (NAD+) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in steroid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase type 1
Names
3 beta-hydroxysteroid dehydrogenase / d5-d4 isomerase
3 beta-hydroxysteroid dehydrogenase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030867095.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAllMis1 Primary Assembly

Genomic

  1. NC_081824.1 Reference rAllMis1 Primary Assembly

    Range
    239007586..239021695 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006275551.4 → XP_006275613.1  3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase type 1

    UniProtKB/TrEMBL
    A0A151M1V0
    Related
    ENSAMIP00015022299.1, ENSAMIT00015031437.1
    Conserved Domains (2) summary
    pfam01073
    Location:9 → 291
    3Beta_HSD; 3-beta hydroxysteroid dehydrogenase/isomerase family
    cl21454
    Location:8 → 361
    NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins
Nucleotide Protein
Heading Accession and Version

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