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LOC109254375 torsin-1A-interacting protein 2-like [ Panthera pardus (leopard) ]

Gene ID: 109254375, updated on 20-Nov-2023

Summary

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Gene symbol
LOC109254375
Gene description
torsin-1A-interacting protein 2-like
See related
Ensembl:ENSPPRG00000011986
Gene type
protein coding
RefSeq status
MODEL
Organism
Panthera pardus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Pantherinae; Panthera
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Genomic context

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See LOC109254375 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_02 current ASM2436296v1 (GCF_024362965.1) Unplaced Scaffold NW_026526777.1 (40887880..40924527, complement)
100 previous assembly PanPar1.0 (GCF_001857705.1) Unplaced Scaffold NW_017619849.1 (28193092..28227944)

NW_026526777.1Genomic Context describing neighboring genes Neighboring gene cytochrome c oxidase subunit 1-like Neighboring gene potassium two pore domain channel subfamily K member 2 Neighboring gene torsin-1A-interacting protein 2 Neighboring gene torsin 1A interacting protein 1 Neighboring gene centrosomal protein 350

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endoplasmic reticulum organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in membrane organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
torsin-1A-interacting protein 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_024362965.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2436296v1 Primary Assembly

Genomic

  1. NW_026526777.1 Reference ASM2436296v1 Primary Assembly

    Range
    40887880..40924527 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019428207.2 → XP_019283752.2  torsin-1A-interacting protein 2-like

    UniProtKB/TrEMBL
    A0A9V1EKQ7
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases