U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC109234558 GPI mannosyltransferase 3 [ Nicotiana attenuata ]

Gene ID: 109234558, updated on 21-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC109234558
Gene description
GPI mannosyltransferase 3
Locus tag
A4A49_05656
Gene type
protein coding
RefSeq status
MODEL
Organism
Nicotiana attenuata
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC109234558 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
9
Annotation release Status Assembly Chr Location
100 current NIATTr2 (GCF_001879085.1) 11 NC_031999.1 (54159177..54163234, complement)

Chromosome 11 - NC_031999.1Genomic Context describing neighboring genes Neighboring gene caffeoylshikimate esterase-like Neighboring gene VAN3-binding protein Neighboring gene uncharacterized LOC109234559 Neighboring gene probable E3 ubiquitin-protein ligase XBOS32

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_031999.1 Chromosome 11 Reference NIATTr2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Molecular evolution and diversification of the Argonaute family of proteins in plants. Singh RK, et al. BMC Plant Biol, 2015 Jan 28. PMID 25626325, Free PMC Article
  2. Cytokinin levels and signaling respond to wounding and the perception of herbivore elicitors in Nicotiana attenuata. Schäfer M, et al. J Integr Plant Biol, 2015 Feb. PMID 24924599, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,2-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
GPI mannosyltransferase 3

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Nicotiana attenuata Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NIATTr2

Genomic

  1. NC_031999.1 Reference NIATTr2

    Range
    54159177..54163234 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019400588.1 → XP_019256133.1  GPI mannosyltransferase 3

    UniProtKB/TrEMBL
    A0A1J6IHS9
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases