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LOC109223416 callose synthase 9 [ Nicotiana attenuata ]

Gene ID: 109223416, updated on 21-Dec-2023

Summary

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Gene symbol
LOC109223416
Gene description
callose synthase 9
Locus tag
A4A49_33110
Gene type
protein coding
RefSeq status
MODEL
Organism
Nicotiana attenuata
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Also known as
CALS9_1
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Genomic context

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See LOC109223416 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
52
Annotation release Status Assembly Chr Location
100 current NIATTr2 (GCF_001879085.1) 3 NC_031991.1 (24851818..24894758, complement)

Chromosome 3 - NC_031991.1Genomic Context describing neighboring genes Neighboring gene flowering-promoting factor 1-like Neighboring gene uncharacterized LOC109223417 Neighboring gene exocyst complex component EXO70A1-like Neighboring gene exocyst complex component EXO70A1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_031991.1 Chromosome 3 Reference NIATTr2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Molecular evolution and diversification of the Argonaute family of proteins in plants. Singh RK, et al. BMC Plant Biol, 2015 Jan 28. PMID 25626325, Free PMC Article
  2. Cytokinin levels and signaling respond to wounding and the perception of herbivore elicitors in Nicotiana attenuata. Schäfer M, et al. J Integr Plant Biol, 2015 Feb. PMID 24924599, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1,3-beta-D-glucan synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in (1->3)-beta-D-glucan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of 1,3-beta-D-glucan synthase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
callose synthase 9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nicotiana attenuata Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NIATTr2

Genomic

  1. NC_031991.1 Reference NIATTr2

    Range
    24851818..24894758 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019387717.1 → XP_019243262.1  callose synthase 9

    UniProtKB/TrEMBL
    A0A1J6II41
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases