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LOC109204044 alpha-(1,3)-fucosyltransferase 9-like [ Oreochromis niloticus (Nile tilapia) ]

Gene ID: 109204044, updated on 21-Dec-2023

Summary

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Gene symbol
LOC109204044
Gene description
alpha-(1,3)-fucosyltransferase 9-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Oreochromis niloticus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Oreochromini; Oreochromis
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Genomic context

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See LOC109204044 in Genome Data Viewer
Location:
chromosome: LG11
Exon count:
2
Annotation release Status Assembly LG Location
104 current O_niloticus_UMD_NMBU (GCF_001858045.2) LG11 NC_031976.2 (16167583..16172925, complement)
103 previous assembly ASM185804v2 (GCF_001858045.1) LG11 NC_031976.1 (18820280..18825656, complement)

Linkage Group LG11 - NC_031976.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109204130 Neighboring gene uncharacterized LOC112848157 Neighboring gene uncharacterized LOC106097573 Neighboring gene alpha-(1,3)-fucosyltransferase 9-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-(1->3)-fucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fucosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-(1,3)-fucosyltransferase 9-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oreochromis niloticus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference O_niloticus_UMD_NMBU Primary Assembly

Genomic

  1. NC_031976.2 Reference O_niloticus_UMD_NMBU Primary Assembly

    Range
    16167583..16172925 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019364202.2 → XP_019219747.1  alpha-(1,3)-fucosyltransferase 9-like

    UniProtKB/TrEMBL
    A0A669F5V3
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases