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LOC109188143 anthocyanidin 3-O-glucoside 2''-O-glucosyltransferase [ Ipomoea nil (Japanese morning glory) ]

Gene ID: 109188143, updated on 31-Jan-2024

Summary

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Gene symbol
LOC109188143
Gene description
anthocyanidin 3-O-glucoside 2''-O-glucosyltransferase
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Ipomoea nil
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Also known as
Dy; 3GGT; Dusky; In3GGT
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Genomic context

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See LOC109188143 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
100 current Asagao_1.1 (GCF_001879475.1) Unplaced Scaffold NW_017617849.1 (4053374..4055044)

NW_017617849.1Genomic Context describing neighboring genes Neighboring gene acyl-coenzyme A oxidase 3, peroxisomal-like Neighboring gene acyl-coenzyme A oxidase 3, peroxisomal-like Neighboring gene trans-resveratrol di-O-methyltransferase-like Neighboring gene trans-resveratrol di-O-methyltransferase-like Neighboring gene trans-resveratrol di-O-methyltransferase-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017617849.1 Unplaced Scaffold Reference Asagao_1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Japanese morning glory dusky mutants displaying reddish-brown or purplish-gray flowers are deficient in a novel glycosylation enzyme for anthocyanin biosynthesis, UDP-glucose:anthocyanidin 3-O-glucoside-2''-O-glucosyltransferase, due to 4-bp insertions in the gene. Morita Y, et al. Plant J, 2005 May. PMID 15842621
  2. Genome sequence and analysis of the Japanese morning glory Ipomoea nil. Hoshino A, et al. Nat Commun, 2016 Nov 8. PMID 27824041, Free PMC Article
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
anthocyanidin 3-O-glucoside 2''-O-glucosyltransferase
Names
3-O-glucoside-2''-O-glucosyltransferase
Protein dusky
glucosyltransferase
XP_019194233.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001426057.1 → NP_001412986.1  anthocyanidin 3-O-glucoside 2''-O-glucosyltransferase

    Status: VALIDATED

    Source sequence(s)
    AB192314, HY922928
    UniProtKB/Swiss-Prot
    Q53UH2, Q53UH3, Q53UH4

RefSeqs of Annotated Genomes: Ipomoea nil Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Asagao_1.1 Primary Assembly

Genomic

  1. NW_017617849.1 Reference Asagao_1.1 Primary Assembly

    Range
    4053374..4055044
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019338688.1 → XP_019194233.1  anthocyanidin 3-O-glucoside 2''-O-glucosyltransferase

    UniProtKB/Swiss-Prot
    Q53UH2, Q53UH3, Q53UH4
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q53UH4.1 GenPept UniProtKB/Swiss-Prot:Q53UH4

Gene LinkOut

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Molecular Biology Databases