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LOC109184240 digalactosyldiacylglycerol synthase 2, chloroplastic [ Ipomoea nil (Japanese morning glory) ]

Gene ID: 109184240, updated on 21-Dec-2023

Summary

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Gene symbol
LOC109184240
Gene description
digalactosyldiacylglycerol synthase 2, chloroplastic
Gene type
protein coding
RefSeq status
MODEL
Organism
Ipomoea nil
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Genomic context

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See LOC109184240 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current Asagao_1.1 (GCF_001879475.1) Unplaced Scaffold NW_017616616.1 (3933871..3938515, complement)

NW_017616616.1Genomic Context describing neighboring genes Neighboring gene cytochrome P450 704C1-like Neighboring gene spastin Neighboring gene APO protein 3, mitochondrial Neighboring gene transfer RNA valine (anticodon AAC) Neighboring gene uncharacterized LOC109184282 Neighboring gene methionine adenosyltransferase 2 subunit beta

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017616616.1 Unplaced Scaffold Reference Asagao_1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables digalactosyldiacylglycerol synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in galactolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in chloroplast outer membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
digalactosyldiacylglycerol synthase 2, chloroplastic

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ipomoea nil Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Asagao_1.1 Primary Assembly

Genomic

  1. NW_017616616.1 Reference Asagao_1.1 Primary Assembly

    Range
    3933871..3938515 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019334273.1 → XP_019189818.1  digalactosyldiacylglycerol synthase 2, chloroplastic

  2. XM_019334275.1 → XP_019189820.1  digalactosyldiacylglycerol synthase 2, chloroplastic

Nucleotide Protein
Heading Accession and Version

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