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LOC109182076 sulfoquinovosyl transferase SQD2-like [ Ipomoea nil (Japanese morning glory) ]

Gene ID: 109182076, updated on 21-Dec-2023

Summary

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Gene symbol
LOC109182076
Gene description
sulfoquinovosyl transferase SQD2-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Ipomoea nil
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Genomic context

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See LOC109182076 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
100 current Asagao_1.1 (GCF_001879475.1) Unplaced Scaffold NW_017617471.1 (5958661..5962556)

NW_017617471.1Genomic Context describing neighboring genes Neighboring gene josephin-like protein Neighboring gene protein FLUORESCENT IN BLUE LIGHT, chloroplastic-like Neighboring gene transcription factor DIVARICATA-like Neighboring gene laccase-4-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017617471.1 Unplaced Scaffold Reference Asagao_1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-sulfoquinovose:DAG sulfoquinovosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sulfolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in chloroplast envelope IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sulfoquinovosyl transferase SQD2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ipomoea nil Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Asagao_1.1 Primary Assembly

Genomic

  1. NW_017617471.1 Reference Asagao_1.1 Primary Assembly

    Range
    5958661..5962556
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019332114.1 → XP_019187659.1  sulfoquinovosyl transferase SQD2-like

Nucleotide Protein
Heading Accession and Version

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