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LOC109170629 alkylated DNA repair protein alkB homolog 8 [ Ipomoea nil (Japanese morning glory) ]

Gene ID: 109170629, updated on 21-Dec-2023

Summary

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Gene symbol
LOC109170629
Gene description
alkylated DNA repair protein alkB homolog 8
Gene type
protein coding
RefSeq status
MODEL
Organism
Ipomoea nil
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Genomic context

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See LOC109170629 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
100 current Asagao_1.1 (GCF_001879475.1) Unplaced Scaffold NW_017619749.1 (4072809..4075035)

NW_017619749.1Genomic Context describing neighboring genes Neighboring gene putative leucine-rich repeat-containing protein DDB_G0290503 Neighboring gene uncharacterized LOC109169735 Neighboring gene uncharacterized protein At4g37920, chloroplastic Neighboring gene uncharacterized LOC109170552

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017619749.1 Unplaced Scaffold Reference Asagao_1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables S-adenosylmethionine-dependent methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tRNA wobble uridine modification IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alkylated DNA repair protein alkB homolog 8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ipomoea nil Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Asagao_1.1 Primary Assembly

Genomic

  1. NW_017619749.1 Reference Asagao_1.1 Primary Assembly

    Range
    4072809..4075035
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019319824.1 → XP_019175369.1  alkylated DNA repair protein alkB homolog 8

  2. XM_019319825.1 → XP_019175370.1  alkylated DNA repair protein alkB homolog 8

  3. XM_019319826.1 → XP_019175371.1  alkylated DNA repair protein alkB homolog 8

Nucleotide Protein
Heading Accession and Version

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