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LOC109142950 alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 [ Larimichthys crocea (large yellow croaker) ]

Gene ID: 109142950, updated on 9-Nov-2023

Summary

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Gene symbol
LOC109142950
Gene description
alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3
Locus tag
EH28_22440
Gene type
protein coding
RefSeq status
MODEL
Organism
Larimichthys crocea
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Sciaenidae; Larimichthys
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Genomic context

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See LOC109142950 in Genome Data Viewer
Location:
chromosome: IX
Exon count:
4
Annotation release Status Assembly Chr Location
102 current L_crocea_2.0 (GCF_000972845.2) IX NC_040019.1 (2987219..2990703)
101 previous assembly L_crocea_1.0 (GCF_000972845.1) Unplaced Scaffold NW_017609670.1 (1409069..1411383, complement)

Chromosome IX - NC_040019.1Genomic Context describing neighboring genes Neighboring gene dolichyldiphosphatase 1 Neighboring gene mitoguardin 2 Neighboring gene alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 Neighboring gene ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ganglioside biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in oligosaccharide metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Larimichthys crocea Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference L_crocea_2.0 Primary Assembly

Genomic

  1. NC_040019.1 Reference L_crocea_2.0 Primary Assembly

    Range
    2987219..2990703
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027282229.1 → XP_027138030.1  LOW QUALITY PROTEIN: alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3

Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases