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dpm1 dolichyl-phosphate mannosyltransferase subunit 1, catalytic [ Larimichthys crocea (large yellow croaker) ]

Gene ID: 109136814, updated on 14-Mar-2024

Summary

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Gene symbol
dpm1
Gene description
dolichyl-phosphate mannosyltransferase subunit 1, catalytic
Locus tag
EH28_22004
See related
Ensembl:ENSLCRG00005023739
Gene type
protein coding
RefSeq status
MODEL
Organism
Larimichthys crocea
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Sciaenidae; Larimichthys
Orthologs
human zebrafish all
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Genomic context

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See dpm1 in Genome Data Viewer
Location:
chromosome: XV
Exon count:
9
Annotation release Status Assembly Chr Location
102 current L_crocea_2.0 (GCF_000972845.2) XV NC_040025.1 (5362048..5364887)
101 previous assembly L_crocea_1.0 (GCF_000972845.1) Unplaced Scaffold NW_017609727.1 (224535..227673, complement)

Chromosome XV - NC_040025.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 35 member C2 Neighboring gene collagen type XX alpha 1 chain Neighboring gene activity-dependent neuroprotector homeobox b Neighboring gene par-6 partitioning defective 6 homolog beta (C. elegans)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dolichyl-phosphate beta-D-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in dolichol metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dolichol-phosphate mannosyltransferase subunit 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Larimichthys crocea Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference L_crocea_2.0 Primary Assembly

Genomic

  1. NC_040025.1 Reference L_crocea_2.0 Primary Assembly

    Range
    5362048..5364887
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027288662.1 → XP_027144463.1  dolichol-phosphate mannosyltransferase subunit 1 isoform X1

  2. XM_019253245.2 → XP_019108790.1  dolichol-phosphate mannosyltransferase subunit 1 isoform X2

    UniProtKB/TrEMBL
    A0A6G0INT4
    Related
    ENSLCRP00005065062.1, ENSLCRT00005066086.1
    Conserved Domains (1) summary
    PLN02726
    Location:7 → 250
    PLN02726; dolichyl-phosphate beta-D-mannosyltransferase
Nucleotide Protein
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