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Tsp_05910 heparan sulfate 2-O-sulfotransferase hst-2 [ Trichinella spiralis ]

Gene ID: 10911059, updated on 28-Dec-2023

Summary

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Gene symbol
Tsp_05910
Gene description
heparan sulfate 2-O-sulfotransferase hst-2
Locus tag
Tsp_05910
Gene type
protein coding
RNA name
heparan sulfate 2-O-sulfotransferase hst-2
RefSeq status
PROVISIONAL
Organism
Trichinella spiralis (strain: ISS 195)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Trichocephalida; Trichinellidae; Trichinella
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Genomic context

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Location:
chromosome: Unknown
Exon count:
13

NW_003526941.1Genomic Context describing neighboring genes Neighboring gene 5'-AMP-activated protein kinase subunit beta-1 Neighboring gene putative thromboxane-A synthase Neighboring gene heparan sulfate 2-O-sulfotransferase 1 Neighboring gene putative trypsin

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003526941.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The draft genome of the parasitic nematode Trichinella spiralis. Mitreva M, et al. Nat Genet, 2011 Mar. PMID 21336279, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heparan sulfate 2-O-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in heparan sulfate proteoglycan biosynthetic process, enzymatic modification IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
heparan sulfate 2-O-sulfotransferase hst-2

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_003526941.1 Reference assembly

    Range
    5890276..5893867
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003380150.1 → XP_003380198.1  heparan sulfate 2-O-sulfotransferase hst-2 [Trichinella spiralis]

    See identical proteins and their annotated locations for XP_003380198.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    E5S4U3
    Conserved Domains (3) summary
    sd00017
    Location:68 → 89
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:95 → 117
    zf-C2H2; Zinc finger, C2H2 type
    cl22970
    Location:376 → 524
    Sulfotransfer_2; Sulfotransferase family
Nucleotide Protein
Heading Accession and Version

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