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LOC109109112 heparan sulfate glucosamine 3-O-sulfotransferase 1-like [ Cyprinus carpio (common carp) ]

Gene ID: 109109112, updated on 7-Dec-2023

Summary

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Gene symbol
LOC109109112
Gene description
heparan sulfate glucosamine 3-O-sulfotransferase 1-like
See related
Ensembl:ENSCCRG00000005583
Gene type
protein coding
RefSeq status
MODEL
Organism
Cyprinus carpio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Cyprinus
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Genomic context

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See LOC109109112 in Genome Data Viewer
Location:
chromosome: A13
Exon count:
2
Annotation release Status Assembly Chr Location
101 current ASM1834038v1 (GCF_018340385.1) A13 NC_056584.1 (27541512..27596727)
100 previous assembly common carp genome (GCF_000951615.1) 35 NC_031731.1 (18729009..18731136, complement)

Chromosome A13 - NC_056584.1Genomic Context describing neighboring genes Neighboring gene B-cell linker protein-like Neighboring gene DNA nucleotidylexotransferase-like Neighboring gene heparan sulfate glucosamine 3-O-sulfotransferase 1-like Neighboring gene homeobox protein vent1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heparan sulfate glucosamine 3-O-sulfotransferase 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cyprinus carpio Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1834038v1 Primary Assembly

Genomic

  1. NC_056584.1 Reference ASM1834038v1 Primary Assembly

    Range
    27541512..27596727
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042769565.1 → XP_042625499.1  heparan sulfate glucosamine 3-O-sulfotransferase 1-like

    UniProtKB/TrEMBL
    A0A9J7Z224, A0A9Q9YSC3
    Conserved Domains (1) summary
    cl21551
    Location:57 → 258
    Sulfotransfer_3; Sulfotransferase family
Nucleotide Protein
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