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acsf3 acyl-CoA synthetase family member 3 [ Cyprinus carpio (common carp) ]

Gene ID: 109099865, updated on 14-Mar-2024

Summary

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Gene symbol
acsf3
Gene description
acyl-CoA synthetase family member 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Cyprinus carpio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Cyprinus
Orthologs
human zebrafish all
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Genomic context

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See acsf3 in Genome Data Viewer
Location:
chromosome: B7
Exon count:
12
Annotation release Status Assembly Chr Location
101 current ASM1834038v1 (GCF_018340385.1) B7 NC_056603.1 (36624739..36671307)
100 previous assembly common carp genome (GCF_000951615.1) 24 NC_031720.1 (2717876..2738479)

Chromosome B7 - NC_056603.1Genomic Context describing neighboring genes Neighboring gene CBFA2/RUNX1 partner transcriptional co-repressor 3 Neighboring gene uncharacterized LOC122138026 Neighboring gene cadherin 15, type 1, M-cadherin (myotubule) Neighboring gene SPG7 matrix AAA peptidase subunit, paraplegin

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables medium-chain fatty acid-CoA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
malonate--CoA ligase ACSF3, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cyprinus carpio Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1834038v1 Primary Assembly

Genomic

  1. NC_056603.1 Reference ASM1834038v1 Primary Assembly

    Range
    36624739..36671307
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042728490.1 → XP_042584424.1  malonate--CoA ligase ACSF3, mitochondrial

    UniProtKB/TrEMBL
    A0A8C1V0S8, A0A9Q9WK66
    Conserved Domains (1) summary
    cd05941
    Location:64 → 577
    MCS; Malonyl-CoA synthetase (MCS)

  2. XM_042728491.1 → XP_042584425.1  malonate--CoA ligase ACSF3, mitochondrial

    UniProtKB/TrEMBL
    A0A8C1V0S8, A0A9Q9WK66
    Conserved Domains (1) summary
    cd05941
    Location:64 → 577
    MCS; Malonyl-CoA synthetase (MCS)

  3. XM_042728489.1 → XP_042584423.1  malonate--CoA ligase ACSF3, mitochondrial

    UniProtKB/TrEMBL
    A0A8C1V0S8, A0A9Q9WK66
    Conserved Domains (1) summary
    cd05941
    Location:64 → 577
    MCS; Malonyl-CoA synthetase (MCS)

  4. XM_042728492.1 → XP_042584426.1  malonate--CoA ligase ACSF3, mitochondrial

    UniProtKB/TrEMBL
    A0A8C1V0S8, A0A9Q9WK66
    Conserved Domains (1) summary
    cd05941
    Location:64 → 577
    MCS; Malonyl-CoA synthetase (MCS)
Nucleotide Protein
Heading Accession and Version

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