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pigb phosphatidylinositol glycan anchor biosynthesis, class B [ Cyprinus carpio (common carp) ]

Gene ID: 109093388, updated on 14-Mar-2024

Summary

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Gene symbol
pigb
Gene description
phosphatidylinositol glycan anchor biosynthesis, class B
See related
Ensembl:ENSCCRG00000001478
Gene type
protein coding
RefSeq status
MODEL
Organism
Cyprinus carpio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Cyprinus
Orthologs
human zebrafish all
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Genomic context

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See pigb in Genome Data Viewer
Location:
chromosome: B18
Exon count:
12
Annotation release Status Assembly Chr Location
101 current ASM1834038v1 (GCF_018340385.1) B18 NC_056614.1 (24081659..24089856)
100 previous assembly common carp genome (GCF_000951615.1) 13 NC_031709.1 (19498351..19506484, complement)

Chromosome B18 - NC_056614.1Genomic Context describing neighboring genes Neighboring gene RAB27A, member RAS oncogene family Neighboring gene uncharacterized LOC109093586 Neighboring gene cell cycle progression protein 1-like Neighboring gene uncharacterized LOC109072478

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,2-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GPI mannosyltransferase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cyprinus carpio Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1834038v1 Primary Assembly

Genomic

  1. NC_056614.1 Reference ASM1834038v1 Primary Assembly

    Range
    24081659..24089856
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019107110.2 → XP_018962655.2  GPI mannosyltransferase 3

    UniProtKB/TrEMBL
    A0A8C1YPG0, A0A9Q9VCQ2
    Conserved Domains (1) summary
    cl21590
    Location:47 → 519
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase
Nucleotide Protein
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Gene LinkOut

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