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cog5 component of oligomeric golgi complex 5 [ Cyprinus carpio (common carp) ]

Gene ID: 109085998, updated on 14-Mar-2024

Summary

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Gene symbol
cog5
Gene description
component of oligomeric golgi complex 5
See related
Ensembl:ENSCCRG00000036890
Gene type
protein coding
RefSeq status
MODEL
Organism
Cyprinus carpio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Cyprinus
Orthologs
human zebrafish all
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Genomic context

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See cog5 in Genome Data Viewer
Location:
chromosome: B4
Exon count:
22
Annotation release Status Assembly Chr Location
101 current ASM1834038v1 (GCF_018340385.1) B4 NC_056600.1 (3019563..3092162, complement)
100 previous assembly common carp genome (GCF_000951615.1) Unplaced Scaffold NW_017543761.1 (37524..112731)

Chromosome B4 - NC_056600.1Genomic Context describing neighboring genes Neighboring gene cysteine and glycine-rich protein 2-like Neighboring gene transcription factor E2F7-like Neighboring gene G-protein coupled receptor 22-like Neighboring gene B-cell receptor-associated protein 29-like Neighboring gene solute carrier organic anion transporter family member 1C1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in intra-Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Golgi transport complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
conserved oligomeric Golgi complex subunit 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cyprinus carpio Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1834038v1 Primary Assembly

Genomic

  1. NC_056600.1 Reference ASM1834038v1 Primary Assembly

    Range
    3019563..3092162 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019100486.2 → XP_018956031.2  conserved oligomeric Golgi complex subunit 5

    UniProtKB/TrEMBL
    A0A8C2HB40, A0A9J8CCZ5, A0A9Q9VAD5
    Conserved Domains (1) summary
    pfam10392
    Location:21 → 143
    COG5; Golgi transport complex subunit 5
Nucleotide Protein
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