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LOC109085939 KICSTOR complex protein kaptin-like [ Cyprinus carpio (common carp) ]

Gene ID: 109085939, updated on 7-Dec-2023

Summary

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Gene symbol
LOC109085939
Gene description
KICSTOR complex protein kaptin-like
See related
Ensembl:ENSCCRG00000015307
Gene type
protein coding
RefSeq status
MODEL
Organism
Cyprinus carpio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Cyprinus
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Genomic context

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See LOC109085939 in Genome Data Viewer
Location:
chromosome: A5
Exon count:
12
Annotation release Status Assembly Chr Location
101 current ASM1834038v1 (GCF_018340385.1) A5 NC_056576.1 (21349761..21354550, complement)
100 previous assembly common carp genome (GCF_000951615.1) 9 NC_031705.1 (14760715..14764131)

Chromosome A5 - NC_056576.1Genomic Context describing neighboring genes Neighboring gene serine/arginine-rich splicing factor 7-like Neighboring gene heterogeneous nuclear ribonucleoprotein L Neighboring gene homeobox protein otx5-like Neighboring gene histone H3.3A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin filament organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cellular response to amino acid starvation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of TORC1 signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of KICSTOR complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in actin cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lamellipodium IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
KICSTOR complex protein kaptin-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cyprinus carpio Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1834038v1 Primary Assembly

Genomic

  1. NC_056576.1 Reference ASM1834038v1 Primary Assembly

    Range
    21349761..21354550 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019100428.2 → XP_018955973.1  KICSTOR complex protein kaptin-like

    UniProtKB/TrEMBL
    A0A8C1X584, A0A9Q9VAG0
    Related
    ENSCCRP00000028369.1
Nucleotide Protein
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