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LOC109081752 gamma-sarcoglycan-like [ Cyprinus carpio (common carp) ]

Gene ID: 109081752, updated on 7-Dec-2023

Summary

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Gene symbol
LOC109081752
Gene description
gamma-sarcoglycan-like
See related
Ensembl:ENSCCRG00000048744
Gene type
protein coding
RefSeq status
MODEL
Organism
Cyprinus carpio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Cyprinus
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Genomic context

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Location:
chromosome: A15
Exon count:
8
Annotation release Status Assembly Chr Location
101 current ASM1834038v1 (GCF_018340385.1) A15 NC_056586.1 (9530542..9541001)
100 previous assembly common carp genome (GCF_000951615.1) Unplaced Scaffold NW_017542593.1 (38254..48742)

Chromosome A15 - NC_056586.1Genomic Context describing neighboring genes Neighboring gene calmodulin-1 Neighboring gene glucose-6-phosphate exchanger SLC37A4-like Neighboring gene trafficking protein particle complex subunit 4 Neighboring gene sacsin-like Neighboring gene GRB2-associated binding protein 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cardiac muscle tissue development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heart contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of sarcoglycan complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcolemma IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
gamma-sarcoglycan-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cyprinus carpio Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1834038v1 Primary Assembly

Genomic

  1. NC_056586.1 Reference ASM1834038v1 Primary Assembly

    Range
    9530542..9541001
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042770947.1 → XP_042626881.1  gamma-sarcoglycan-like

    UniProtKB/TrEMBL
    A0A8C1FCA2, A0A8C2A1G9, A0A8C2CDX5, A0A9R1SIL8
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases