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LOC109077565 lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase A-like [ Cyprinus carpio (common carp) ]

Gene ID: 109077565, updated on 2-May-2024

Summary

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Gene symbol
LOC109077565
Gene description
lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase A-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Cyprinus carpio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Cyprinus
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Genomic context

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See LOC109077565 in Genome Data Viewer
Location:
chromosome: A11
Exon count:
2
Annotation release Status Assembly Chr Location
101 current ASM1834038v1 (GCF_018340385.1) A11 NC_056582.1 (9381438..9387931, complement)
100 previous assembly common carp genome (GCF_000951615.1) Unplaced Scaffold NW_017541591.1 (20726..23622)

Chromosome A11 - NC_056582.1Genomic Context describing neighboring genes Neighboring gene sodium-driven chloride bicarbonate exchanger-like Neighboring gene uncharacterized LOC122146586 Neighboring gene guanine nucleotide exchange factor DBS-like Neighboring gene uncharacterized LOC122146587 Neighboring gene lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase A-like Neighboring gene protein ECT2-like Neighboring gene spermatogenesis-associated protein 16-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in brain development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase A-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cyprinus carpio Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1834038v1 Primary Assembly

Genomic

  1. NC_056582.1 Reference ASM1834038v1 Primary Assembly

    Range
    9381438..9387931 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019093119.2 → XP_018948664.2  lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase A-like

    UniProtKB/TrEMBL
    A0A8C1NY46, A0A9Q9V7Y7
    Conserved Domains (1) summary
    cl21608
    Location:102 → 303
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein
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