U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Tsp_02203 polypeptide N-acetylgalactosaminyltransferase 3 [ Trichinella spiralis ]

Gene ID: 10907676, updated on 28-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
Tsp_02203
Gene description
polypeptide N-acetylgalactosaminyltransferase 3
Locus tag
Tsp_02203
Gene type
protein coding
RNA name
polypeptide N-acetylgalactosaminyltransferase 3
RefSeq status
PROVISIONAL
Organism
Trichinella spiralis (strain: ISS 195)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Trichocephalida; Trichinellidae; Trichinella
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Unknown
Exon count:
14

NW_003526943.1Genomic Context describing neighboring genes Neighboring gene putative calsequestrin-1 Neighboring gene eukaryotic translation initiation factor 4E Neighboring gene hypothetical protein Neighboring gene putative arrestin domain protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_003526943.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. The draft genome of the parasitic nematode Trichinella spiralis. Mitreva M, et al. Nat Genet, 2011 Mar. PMID 21336279, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of DRM complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Names
polypeptide N-acetylgalactosaminyltransferase 3

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_003526943.1 Reference assembly

    Range
    9017848..9023269 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003377964.1 → XP_003378012.1  polypeptide N-acetylgalactosaminyltransferase 3 [Trichinella spiralis]

    See identical proteins and their annotated locations for XP_003378012.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0V1BVS1
    Conserved Domains (5) summary
    cd02510
    Location:134 → 434
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    cd00161
    Location:447 → 567
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
    pfam00652
    Location:447 → 565
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
    pfam10044
    Location:574 → 658
    LIN52; Retinal tissue protein
    pfam13641
    Location:134 → 363
    Glyco_tranf_2_3; Glycosyltransferase like family 2
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases