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Tsp_08280 xylosyltransferase oxt [ Trichinella spiralis ]

Gene ID: 10905705, updated on 28-Dec-2023

Summary

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Gene symbol
Tsp_08280
Gene description
xylosyltransferase oxt
Locus tag
Tsp_08280
Gene type
protein coding
RNA name
xylosyltransferase oxt
RefSeq status
PROVISIONAL
Organism
Trichinella spiralis (strain: ISS 195)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Trichocephalida; Trichinellidae; Trichinella
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Genomic context

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Location:
chromosome: Unknown
Exon count:
7

NW_003526944.1Genomic Context describing neighboring genes Neighboring gene Son of sevenless protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene transmembrane BAX inhibitor motif protein-containing protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003526944.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The draft genome of the parasitic nematode Trichinella spiralis. Mitreva M, et al. Nat Genet, 2011 Mar. PMID 21336279, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chondroitin sulfate proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heparan sulfate proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
xylosyltransferase oxt

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_003526944.1 Reference assembly

    Range
    3604452..3608259 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003375234.1 → XP_003375282.1  xylosyltransferase oxt [Trichinella spiralis]

    See identical proteins and their annotated locations for XP_003375282.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    E5SJ52
    Conserved Domains (2) summary
    pfam02485
    Location:143 → 397
    Branch; Core-2/I-Branching enzyme
    cl02568
    Location:65 → 109
    WSC; WSC domain
Nucleotide Protein
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Molecular Biology Databases