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chst14 carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14 [ Cyprinus carpio (common carp) ]

Gene ID: 109051416, updated on 14-Mar-2024

Summary

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Gene symbol
chst14
Gene description
carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14
See related
Ensembl:ENSCCRG00000048088
Gene type
protein coding
RefSeq status
MODEL
Organism
Cyprinus carpio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Cyprinus
Orthologs
human zebrafish all
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Genomic context

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See chst14 in Genome Data Viewer
Location:
chromosome: B20
Exon count:
2
Annotation release Status Assembly Chr Location
101 current ASM1834038v1 (GCF_018340385.1) B20 NC_056616.1 (15091329..15096537, complement)
100 previous assembly common carp genome (GCF_000951615.1) Unplaced Scaffold NW_017537764.1 (177149..181229)

Chromosome B20 - NC_056616.1Genomic Context describing neighboring genes Neighboring gene aminoadipate-semialdehyde dehydrogenase Neighboring gene capping protein inhibiting regulator of actin dynamics Neighboring gene centrosomal protein of 135 kDa-like Neighboring gene exocyst complex component 1 Neighboring gene ectonucleotide pyrophosphatase/phosphodiesterase family member 7-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in dermatan sulfate proteoglycan metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbohydrate sulfotransferase 14

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cyprinus carpio Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1834038v1 Primary Assembly

Genomic

  1. NC_056616.1 Reference ASM1834038v1 Primary Assembly

    Range
    15091329..15096537 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019068975.2 → XP_018924520.1  carbohydrate sulfotransferase 14

    UniProtKB/TrEMBL
    A0A8C1FAA2, A0A8C1S8X8, A0A9Q9UZA1
    Related
    ENSCCRP00000088434.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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