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LOC109048433 heparan sulfate glucosamine 3-O-sulfotransferase 3B1-like [ Cyprinus carpio (common carp) ]

Gene ID: 109048433, updated on 7-Dec-2023

Summary

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Gene symbol
LOC109048433
Gene description
heparan sulfate glucosamine 3-O-sulfotransferase 3B1-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Cyprinus carpio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Cyprinus
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Genomic context

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See LOC109048433 in Genome Data Viewer
Location:
chromosome: B3
Exon count:
2
Annotation release Status Assembly Chr Location
101 current ASM1834038v1 (GCF_018340385.1) B3 NC_056599.1 (14243461..14255469, complement)
100 previous assembly common carp genome (GCF_000951615.1) 45 NC_031741.1 (10842877..10852895)

Chromosome B3 - NC_056599.1Genomic Context describing neighboring genes Neighboring gene C-factor-like Neighboring gene C-factor-like Neighboring gene rho GTPase-activating protein 44-like Neighboring gene RING finger protein 222-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heparan sulfate glucosamine 3-O-sulfotransferase 3B1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cyprinus carpio Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1834038v1 Primary Assembly

Genomic

  1. NC_056599.1 Reference ASM1834038v1 Primary Assembly

    Range
    14243461..14255469 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019066107.2 → XP_018921652.2  heparan sulfate glucosamine 3-O-sulfotransferase 3B1-like

    UniProtKB/TrEMBL
    A0A8C1JCA5, A0A8C1ZRX0, A0A8C2KG95, A0A9J8D9K4, A0A9Q9UY35
Nucleotide Protein
Heading Accession and Version

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