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CHKA choline kinase alpha [ Gorilla gorilla gorilla (western lowland gorilla) ]

Gene ID: 109024848, updated on 1-Oct-2024

Summary

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Gene symbol
CHKA
Gene description
choline kinase alpha
Gene type
protein coding
RefSeq status
MODEL
Organism
Gorilla gorilla gorilla (sub-species: gorilla)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Gorilla
Orthologs
human mouse all
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Genomic context

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See CHKA in Genome Data Viewer
Location:
chromosome: 9
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mGorGor1-v2.0_pri (GCF_029281585.2) 9 NC_073233.2 (75979134..76047875, complement)
RS_2023_04 previous assembly NHGRI_mGorGor1-v1.1-0.2.freeze_pri (GCF_029281585.1) 11 NC_073235.1 (78178057..78246791, complement)

Chromosome 9 - NC_073233.2Genomic Context describing neighboring genes Neighboring gene NADH:ubiquinone oxidoreductase core subunit S8 Neighboring gene T cell immune regulator 1, ATPase H+ transporting V0 subunit a3 Neighboring gene lysine methyltransferase 5B Neighboring gene chromosome 9 C11orf24 homolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables choline kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ethanolamine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in CDP-choline pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phosphatidylethanolamine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
choline kinase alpha

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029281585.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mGorGor1-v2.0_pri Primary Assembly

Genomic

  1. NC_073233.2 Reference NHGRI_mGorGor1-v2.0_pri Primary Assembly

    Range
    75979134..76047875 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031016064.3 → XP_030871924.2  choline kinase alpha isoform X1

  2. XM_063693275.1 → XP_063549345.1  choline kinase alpha isoform X2

  3. XM_031016065.3 → XP_030871925.2  choline kinase alpha isoform X3

  4. XM_055354650.2 → XP_055210625.1  choline kinase alpha isoform X4

RNA

  1. XR_010129141.1 RNA Sequence

  2. XR_010129142.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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