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STBD1 starch binding domain 1 [ Gorilla gorilla gorilla (western lowland gorilla) ]

Gene ID: 109023067, updated on 1-Oct-2024

Summary

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Gene symbol
STBD1
Gene description
starch binding domain 1
See related
Ensembl:ENSGGOG00000010777
Gene type
protein coding
RefSeq status
MODEL
Organism
Gorilla gorilla gorilla (sub-species: gorilla)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Gorilla
Orthologs
human mouse all
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Genomic context

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See STBD1 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mGorGor1-v2.0_pri (GCF_029281585.2) 3 NC_073227.2 (96556898..96562018)
RS_2023_04 previous assembly NHGRI_mGorGor1-v1.1-0.2.freeze_pri (GCF_029281585.1) 4 NC_073228.1 (89354561..89359387)

Chromosome 3 - NC_073227.2Genomic Context describing neighboring genes Neighboring gene scavenger receptor class B member 2 Neighboring gene family with sequence similarity 47 member E Neighboring gene coiled-coil domain containing 158 Neighboring gene sorting nexin-5-like Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycogen binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables starch binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
starch-binding domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029281585.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mGorGor1-v2.0_pri Primary Assembly

Genomic

  1. NC_073227.2 Reference NHGRI_mGorGor1-v2.0_pri Primary Assembly

    Range
    96556898..96562018
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004038856.5 → XP_004038904.3  starch-binding domain-containing protein 1

    UniProtKB/TrEMBL
    G3R5D6
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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