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LOC109022169 probable beta-1,3-galactosyltransferase 2 [ Juglans regia (English walnut) ]

Gene ID: 109022169, updated on 22-Oct-2023

Summary

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Gene symbol
LOC109022169
Gene description
probable beta-1,3-galactosyltransferase 2
Locus tag
F2P56_001756
Gene type
protein coding
RefSeq status
MODEL
Organism
Juglans regia
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
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Genomic context

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See LOC109022169 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
11
Annotation release Status Assembly Chr Location
101 current Walnut 2.0 (GCF_001411555.2) 1 NC_049901.1 (17768602..17774450, complement)
100 previous assembly wgs.5d (GCF_001411555.1) Unplaced Scaffold NW_017438691.1 (7913..13905, complement)

Chromosome 1 - NC_049901.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109022166 Neighboring gene transfer RNA asparagine (anticodon GUU) Neighboring gene NEDD8-activating enzyme E1 regulatory subunit AXR1-like Neighboring gene uncharacterized LOC118348427

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable beta-1,3-galactosyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Juglans regia Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Walnut 2.0 Primary Assembly

Genomic

  1. NC_049901.1 Reference Walnut 2.0 Primary Assembly

    Range
    17768602..17774450 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019004992.2 → XP_018860537.1  probable beta-1,3-galactosyltransferase 2

    UniProtKB/TrEMBL
    A0A2I4HWN8
    Conserved Domains (1) summary
    PLN03193
    Location:1 → 407
    PLN03193; beta-1,3-galactosyltransferase; Provisional
Nucleotide Protein
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