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LOC109015318 putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 5 [ Juglans regia (English walnut) ]

Gene ID: 109015318, updated on 22-Oct-2023

Summary

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Gene symbol
LOC109015318
Gene description
putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 5
Locus tag
F2P56_023715
Gene type
protein coding
RefSeq status
MODEL
Organism
Juglans regia
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
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Genomic context

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See LOC109015318 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
2
Annotation release Status Assembly Chr Location
101 current Walnut 2.0 (GCF_001411555.2) 11 NC_049911.1 (1844212..1847824)
100 previous assembly wgs.5d (GCF_001411555.1) Unplaced Scaffold NW_017394325.1 (7455..11031, complement)

Chromosome 11 - NC_049911.1Genomic Context describing neighboring genes Neighboring gene mitochondrial Rho GTPase 1-like Neighboring gene uncharacterized LOC118349843 Neighboring gene cyclin-P3-1-like Neighboring gene mitogen-activated protein kinase kinase kinase 2-like Neighboring gene U6 spliceosomal RNA Neighboring gene probable microtubule-binding protein TANGLED

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in xylan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Juglans regia Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Walnut 2.0 Primary Assembly

Genomic

  1. NC_049911.1 Reference Walnut 2.0 Primary Assembly

    Range
    1844212..1847824
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018997795.2 → XP_018853340.2  putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 5

    UniProtKB/TrEMBL
    A0A2I4HB28
    Conserved Domains (1) summary
    cd02537
    Location:316 → 557
    GT8_Glycogenin; Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen
Nucleotide Protein
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