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LOC109011954 delta(12)-fatty-acid desaturase FAD2 [ Juglans regia (English walnut) ]

Gene ID: 109011954, updated on 22-Oct-2023

Summary

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Gene symbol
LOC109011954
Gene description
delta(12)-fatty-acid desaturase FAD2
Locus tag
F2P56_005993
Gene type
protein coding
RefSeq status
MODEL
Organism
Juglans regia
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
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Genomic context

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See LOC109011954 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
2
Annotation release Status Assembly Chr Location
101 current Walnut 2.0 (GCF_001411555.2) 3 NC_049903.1 (2680610..2684924, complement)
100 previous assembly wgs.5d (GCF_001411555.1) Unplaced Scaffold NW_017389802.1 (836682..843418, complement)

Chromosome 3 - NC_049903.1Genomic Context describing neighboring genes Neighboring gene probable plastid-lipid-associated protein 13, chloroplastic Neighboring gene VQ motif-containing protein 17 Neighboring gene uncharacterized LOC108979698 Neighboring gene 11 kDa late embryogenesis abundant protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
delta(12)-fatty-acid desaturase FAD2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Juglans regia Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Walnut 2.0 Primary Assembly

Genomic

  1. NC_049903.1 Reference Walnut 2.0 Primary Assembly

    Range
    2680610..2684924 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018993367.2 → XP_018848912.2  delta(12)-fatty-acid desaturase FAD2

    UniProtKB/TrEMBL
    A0A2I4GYE9
    Conserved Domains (1) summary
    PLN02505
    Location:1 → 383
    PLN02505; omega-6 fatty acid desaturase
Nucleotide Protein
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