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LOC109009724 floricaula/leafy homolog [ Juglans regia (English walnut) ]

Gene ID: 109009724, updated on 22-Oct-2023

Summary

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Gene symbol
LOC109009724
Gene description
floricaula/leafy homolog
Locus tag
F2P56_019503
Gene type
protein coding
RefSeq status
MODEL
Organism
Juglans regia
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Also known as
LFY; LFY3; LEAFY
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Genomic context

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Location:
chromosome: 9
Exon count:
3
Annotation release Status Assembly Chr Location
101 current Walnut 2.0 (GCF_001411555.2) 9 NC_049909.1 (474058..477305)
100 previous assembly wgs.5d (GCF_001411555.1) Unplaced Scaffold NW_017389602.1 (443654..448890)

Chromosome 9 - NC_049909.1Genomic Context describing neighboring genes Neighboring gene probable beta-1,4-xylosyltransferase IRX10L Neighboring gene uncharacterized LOC109009722 Neighboring gene E3 ubiquitin-protein ligase ORTHRUS 2-like Neighboring gene magnesium protoporphyrin IX methyltransferase, chloroplastic

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
floricaula/leafy homolog
Names
leafy-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Juglans regia Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Walnut 2.0 Primary Assembly

Genomic

  1. NC_049909.1 Reference Walnut 2.0 Primary Assembly

    Range
    474058..477305
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035694181.1 → XP_035550074.1  floricaula/leafy homolog

    UniProtKB/TrEMBL
    A0A346P847, D1MLK1
    Conserved Domains (2) summary
    pfam01698
    Location:45 → 123
    LFY_SAM; Floricaula / Leafy protein SAM domain
    pfam17538
    Location:210 → 372
    C_LFY_FLO; DNA Binding Domain (C-terminal) Leafy/Floricaula
Nucleotide Protein
Heading Accession and Version

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