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LOC109007746 probable cellulose synthase A catalytic subunit 5 [UDP-forming] [ Juglans regia (English walnut) ]

Gene ID: 109007746, updated on 22-Oct-2023

Summary

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Gene symbol
LOC109007746
Gene description
probable cellulose synthase A catalytic subunit 5 [UDP-forming]
Locus tag
F2P56_025103
Gene type
protein coding
RefSeq status
MODEL
Organism
Juglans regia
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
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Genomic context

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See LOC109007746 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
14
Annotation release Status Assembly Chr Location
101 current Walnut 2.0 (GCF_001411555.2) 11 NC_049911.1 (26882349..26888810, complement)
100 previous assembly wgs.5d (GCF_001411555.1) Unplaced Scaffold NW_017389441.1 (319957..326425)

Chromosome 11 - NC_049911.1Genomic Context describing neighboring genes Neighboring gene indole-3-acetic acid-induced protein ARG7-like Neighboring gene protein lsd90 Neighboring gene histone-lysine N-methyltransferase ATXR7 Neighboring gene uncharacterized protein At1g76660

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cellulose synthase (UDP-forming) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellulose biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in plant-type primary cell wall biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in trans-Golgi network IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable cellulose synthase A catalytic subunit 5 [UDP-forming]

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Juglans regia Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Walnut 2.0 Primary Assembly

Genomic

  1. NC_049911.1 Reference Walnut 2.0 Primary Assembly

    Range
    26882349..26888810 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018987562.2 → XP_018843107.1  probable cellulose synthase A catalytic subunit 5 [UDP-forming]

    UniProtKB/TrEMBL
    A0A2I4GGT1
    Conserved Domains (1) summary
    PLN02436
    Location:1 → 1089
    PLN02436; cellulose synthase A
Nucleotide Protein
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