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LOC109007348 hydroxyproline O-arabinosyltransferase PLENTY-like [ Juglans regia (English walnut) ]

Gene ID: 109007348, updated on 22-Oct-2023

Summary

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Gene symbol
LOC109007348
Gene description
hydroxyproline O-arabinosyltransferase PLENTY-like
Locus tag
F2P56_011583
Gene type
protein coding
RefSeq status
MODEL
Organism
Juglans regia
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
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Genomic context

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See LOC109007348 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
10
Annotation release Status Assembly Chr Location
101 current Walnut 2.0 (GCF_001411555.2) 5 NC_049905.1 (19758694..19764734, complement)
100 previous assembly wgs.5d (GCF_001411555.1) Unplaced Scaffold NW_017389417.1 (279437..323593, complement)

Chromosome 5 - NC_049905.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109007346 Neighboring gene protein SMG7 Neighboring gene S-protein homolog 3-like Neighboring gene S-protein homolog 3-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hydroxyproline O-arabinosyltransferase PLENTY-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Juglans regia Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Walnut 2.0 Primary Assembly

Genomic

  1. NC_049905.1 Reference Walnut 2.0 Primary Assembly

    Range
    19758694..19764734 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018986991.2 → XP_018842536.1  hydroxyproline O-arabinosyltransferase PLENTY-like

    UniProtKB/TrEMBL
    A0A2I4GF59, A0A833XVC5

  2. XM_018986992.2 → XP_018842537.1  hydroxyproline O-arabinosyltransferase PLENTY-like

    UniProtKB/TrEMBL
    A0A2I4GF59, A0A833XVC5
Nucleotide Protein
Heading Accession and Version

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