U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC109006878 digalactosyldiacylglycerol synthase 2, chloroplastic-like [ Juglans regia (English walnut) ]

Gene ID: 109006878, updated on 22-Oct-2023

Summary

Go to the top of the page Help
Gene symbol
LOC109006878
Gene description
digalactosyldiacylglycerol synthase 2, chloroplastic-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Juglans regia
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC109006878 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
4
Annotation release Status Assembly Chr Location
101 current Walnut 2.0 (GCF_001411555.2) 12 NC_049912.1 (4022088..4029458, complement)
100 previous assembly wgs.5d (GCF_001411555.1) Unplaced Scaffold NW_017389367.1 (39982..47542)

Chromosome 12 - NC_049912.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108983212 Neighboring gene uncharacterized LOC108983213 Neighboring gene uncharacterized LOC109006876 Neighboring gene uncharacterized LOC109005712

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables digalactosyldiacylglycerol synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in galactolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in chloroplast outer membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
digalactosyldiacylglycerol synthase 2, chloroplastic-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Juglans regia Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Walnut 2.0 Primary Assembly

Genomic

  1. NC_049912.1 Reference Walnut 2.0 Primary Assembly

    Range
    4022088..4029458 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018986292.2 → XP_018841837.1  digalactosyldiacylglycerol synthase 2, chloroplastic-like

    UniProtKB/TrEMBL
    A0A2I4GD56
    Conserved Domains (1) summary
    cl10013
    Location:1 → 462
    Glycosyltransferase_GTB-type; glycosyltransferase family 1 and related proteins with GTB topology
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases