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LOC109004236 callose synthase 12-like [ Juglans regia (English walnut) ]

Gene ID: 109004236, updated on 22-Oct-2023

Summary

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Gene symbol
LOC109004236
Gene description
callose synthase 12-like
Locus tag
F2P56_022481
Gene type
protein coding
RefSeq status
MODEL
Organism
Juglans regia
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
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Genomic context

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See LOC109004236 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
2
Annotation release Status Assembly Chr Location
101 current Walnut 2.0 (GCF_001411555.2) 10 NC_049910.1 (14815066..14823907)
100 previous assembly wgs.5d (GCF_001411555.1) Unplaced Scaffold NW_017388835.1 (507647..516470, complement)

Chromosome 10 - NC_049910.1Genomic Context describing neighboring genes Neighboring gene riboflavin synthase Neighboring gene putative uncharacterized protein DDB_G0294196 Neighboring gene small nucleolar RNA J33 Neighboring gene uncharacterized LOC118349646 Neighboring gene two pore calcium channel protein 1B-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1,3-beta-D-glucan synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in (1->3)-beta-D-glucan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of 1,3-beta-D-glucan synthase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
callose synthase 12-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Juglans regia Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Walnut 2.0 Primary Assembly

Genomic

  1. NC_049910.1 Reference Walnut 2.0 Primary Assembly

    Range
    14815066..14823907
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018982720.2 → XP_018838265.2  callose synthase 12-like

    UniProtKB/TrEMBL
    A0A2I4G329
    Conserved Domains (2) summary
    pfam02364
    Location:865 → 1630
    Glucan_synthase; 1,3-beta-glucan synthase component
    pfam14288
    Location:162 → 263
    FKS1_dom1; 1,3-beta-glucan synthase subunit FKS1, domain-1
Nucleotide Protein
Heading Accession and Version

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