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LOC109001495 callose synthase 2 [ Juglans regia (English walnut) ]

Gene ID: 109001495, updated on 22-Oct-2023

Summary

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Gene symbol
LOC109001495
Gene description
callose synthase 2
Locus tag
F2P56_031502
Gene type
protein coding
RefSeq status
MODEL
Organism
Juglans regia
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
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Genomic context

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See LOC109001495 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
43
Annotation release Status Assembly Chr Location
101 current Walnut 2.0 (GCF_001411555.2) 14 NC_049914.1 (65919..100691)
100 previous assembly wgs.5d (GCF_001411555.1) Unplaced Scaffold NW_017388963.1 (33018..67910)

Chromosome 14 - NC_049914.1Genomic Context describing neighboring genes Neighboring gene AAA-ATPase At4g30250-like Neighboring gene uncharacterized LOC109001485 Neighboring gene major facilitator superfamily domain-containing protein 12-like Neighboring gene uncharacterized mitochondrial protein AtMg00810-like Neighboring gene uncharacterized LOC109001486

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1,3-beta-D-glucan synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in (1->3)-beta-D-glucan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of 1,3-beta-D-glucan synthase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
callose synthase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Juglans regia Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Walnut 2.0 Primary Assembly

Genomic

  1. NC_049914.1 Reference Walnut 2.0 Primary Assembly

    Range
    65919..100691
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018978801.2 → XP_018834346.1  callose synthase 2 isoform X1

    UniProtKB/TrEMBL
    A0A2I4FRR3
    Conserved Domains (3) summary
    pfam02364
    Location:1045 → 1803
    Glucan_synthase; 1,3-beta-glucan synthase component
    pfam04652
    Location:46 → 168
    Vta1; Vta1 like
    pfam14288
    Location:316 → 429
    FKS1_dom1; 1,3-beta-glucan synthase subunit FKS1, domain-1

  2. XM_035685500.1 → XP_035541393.1  callose synthase 2 isoform X2

    UniProtKB/TrEMBL
    A0A6P9EAM3
    Conserved Domains (3) summary
    pfam02364
    Location:1045 → 1482
    Glucan_synthase; 1,3-beta-glucan synthase component
    pfam04652
    Location:46 → 168
    Vta1; Vta1 like
    pfam14288
    Location:316 → 429
    FKS1_dom1; 1,3-beta-glucan synthase subunit FKS1, domain-1
Nucleotide Protein
Heading Accession and Version

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