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LOC108995581 beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase-like [ Juglans regia (English walnut) ]

Gene ID: 108995581, updated on 22-Oct-2023

Summary

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Gene symbol
LOC108995581
Gene description
beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase-like
Locus tag
F2P56_002794
Gene type
protein coding
RefSeq status
MODEL
Organism
Juglans regia
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
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Genomic context

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See LOC108995581 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
2
Annotation release Status Assembly Chr Location
101 current Walnut 2.0 (GCF_001411555.2) 1 NC_049901.1 (41057352..41060946, complement)
100 previous assembly wgs.5d (GCF_001411555.1) Unplaced Scaffold NW_017443583.1 (404283..407580, complement)

Chromosome 1 - NC_049901.1Genomic Context describing neighboring genes Neighboring gene topless-related protein 4-like Neighboring gene beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase-like Neighboring gene topless-related protein 4-like Neighboring gene auxin-responsive protein IAA29-like Neighboring gene transcription factor TT2-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-acetylglucosamine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Juglans regia Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Walnut 2.0 Primary Assembly

Genomic

  1. NC_049901.1 Reference Walnut 2.0 Primary Assembly

    Range
    41057352..41060946 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018971170.2 → XP_018826715.1  beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase-like

    UniProtKB/TrEMBL
    A0A2I4F4Y7, A0A833YAV1
    Conserved Domains (1) summary
    pfam04724
    Location:12 → 360
    Glyco_transf_17; Glycosyltransferase family 17
Nucleotide Protein
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