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LOC108993907 rhamnogalacturonan I rhamnosyltransferase 1-like [ Juglans regia (English walnut) ]

Gene ID: 108993907, updated on 22-Oct-2023

Summary

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Gene symbol
LOC108993907
Gene description
rhamnogalacturonan I rhamnosyltransferase 1-like
Locus tag
F2P56_012954
Gene type
protein coding
RefSeq status
MODEL
Organism
Juglans regia
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
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Genomic context

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See LOC108993907 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
4
Annotation release Status Assembly Chr Location
101 current Walnut 2.0 (GCF_001411555.2) 6 NC_049906.1 (24467530..24468669)
100 previous assembly wgs.5d (GCF_001411555.1) Unplaced Scaffold NW_017443558.1 (815795..844199, complement)

Chromosome 6 - NC_049906.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC118348715 Neighboring gene uncharacterized LOC108993921 Neighboring gene receptor-like protein 1 Neighboring gene uncharacterized LOC108993904

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
rhamnogalacturonan I rhamnosyltransferase 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Juglans regia Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Walnut 2.0 Primary Assembly

Genomic

  1. NC_049906.1 Reference Walnut 2.0 Primary Assembly

    Range
    24467530..24468669
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035690714.1 → XP_035546607.1  rhamnogalacturonan I rhamnosyltransferase 1-like

    UniProtKB/TrEMBL
    A0A6P9EVK6
    Conserved Domains (1) summary
    cl16914
    Location:1 → 124
    O-FucT_like; GDP-fucose protein O-fucosyltransferase and related proteins
Nucleotide Protein
Heading Accession and Version

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